New Biocham-web has been released. Try it online!
New Biocham 3.5 has been released in November 2013.
The Biochemical Abstract Machine (Biocham) is a modelling
environment for systems biology, with some unique features for
static analysis or for
inferring unknown model parameters from temporal logic constraints.
Biocham is mainly composed of :
Biocham is a free software protected by the GNU General Public License
GPL version 2. This is an Open Source license that allows free
of this software.
Feedback on the use of Biocham in applications, research or teaching are particularly welcomed.
You can also try running some Biocham commands through the online version.
Try the last version of Biocham online as a Web service.
We recommend that you have already installed first Java version >= 1.5 for using the GUI of BIOCHAM.
Then you just need to execute and follow the instructions of the
Source version: Biocham-3.5.tar.bz2.
To install from source (which may be difficult on some platforms), and to be able to use all the features of Biocham, you need to install also:
The installation then basically proceeds by
is needed on your machine, you may need to install also:
The file INSTALL explains the compilation and installation procedure for Windows, Linux and Mac OS X (at least 10.4).
See the bibliography of the user's manual
Mail to firstname.lastname@example.org