Sylvain Soliman's Den
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Scalable Enumeration of Trap Spaces in Boolean Networks via Answer Set Programming
Publications
MetaLo: metabolic analysis of Logical models extracted from molecular interaction maps
Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches
Trappist is a tool for computing minimal trap spaces of a Boolean model.
Posts
Trap spaces of Boolean networks are conflict-free siphons of their Petri net encoding
Hybrid computational modeling highlights reverse warburg effect in breast cancer-associated fibroblasts
Efficient Enumeration of Fixed Points in Complex Boolean Networks Using Answer Set Programming
A large-scale Boolean model of the rheumatoid arthritis fibroblast-like synoviocytes predicts drug synergies in the arthritic joint
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